SOP templatesLaboratory

Centrifuge Operation SOP Template

A ready-to-use SOP for operating a laboratory centrifuge safely, covering rotor selection, balancing tubes, running a cycle and cleaning up afterward.

FreeNo sign-upWord, PDF, Excel & CSV
Ilia PirozhenkoReviewed by Ilia Pirozhenko, Founder, Perfect WikiUpdated September 15, 202612 steps3 roles3 min read
Standard operating procedureSOP-LAB-011 ยท Rev 1.0
Owner
Laboratory Supervisor
Effective date
September 15, 2026
Review cycle
Every 12 months

1.Purpose

To operate laboratory centrifuges safely and consistently so that samples are processed correctly and equipment damage or injury from imbalance is prevented.

2.Scope

Applies to benchtop and floor-model centrifuges used to separate samples by density. Does not cover ultracentrifuges, which require manufacturer-specific training.

Definitions

Rotor
The removable component that holds sample tubes and spins inside the centrifuge.
Imbalance
An uneven weight distribution across the rotor that can cause vibration, damage or a safety hazard.
RCF
Relative centrifugal force, the effective spin force applied to a sample, often used instead of RPM in test methods.

3.Responsibilities

Lab Technician
Loads, balances and operates the centrifuge, and reports vibration or unusual noise.
Lab Supervisor
Approves protocol parameters and investigates reported imbalance or damage events.
Maintenance Technician
Services the centrifuge, replaces worn rotors or seals, and clears it to return to use.

RACI matrix

ActivityLab TechnicianLab SupervisorMaintenance Technician
Inspect centrifuge before useR/AI-
Balance and load sample tubesR/A--
Set and approve run parametersRA-
Service or repair the centrifugeICR/A

R = Responsible, A = Accountable, C = Consulted, I = Informed

4.Materials and PPE

Materials, tools and systems

  • โ†’Analytical or top-loading balance for tube balancing
  • โ†’Matched sample tubes and rotor buckets
  • โ†’Rotor and chamber cleaning supplies
  • โ†’Centrifuge usage and maintenance log
  • โ†’Manufacturer's operating manual for each rotor

Personal protective equipment

  • โ†’Disposable nitrile gloves
  • โ†’Safety glasses
  • โ†’Lab coat

5.Procedure

  1. 5.1

    Inspect the centrifuge before use

    Lab Technician

    Check the chamber, rotor and lid gasket for cracks, corrosion or debris, and confirm the unit is level and unobstructed before starting.

  2. 5.2

    Select the correct rotor

    Lab Technician

    Confirm the rotor installed matches the tube size and the speed and RCF required by the test method.

  3. 5.3

    Weigh and balance tubes

    Lab Technician

    Weigh each filled tube on the balance and pair it with a tube of matching weight directly opposite it in the rotor, using a balance blank if an odd number of samples is run.

    Checkpoint: Opposing tube pairs are within the rotor manufacturer's stated weight tolerance.

  4. 5.4

    Load tubes symmetrically

    Lab Technician

    Place balanced tube pairs into opposite rotor positions, filling the rotor symmetrically rather than clustering tubes on one side.

    Warning: Never run the centrifuge with an unbalanced or partially loaded rotor pattern.

  5. 5.5

    Secure the rotor lid and chamber lid

    Lab Technician

    Close and lock the rotor lid, then close and latch the centrifuge chamber lid before entering any run parameters.

  6. 5.6

    Set run parameters

    Lab Technician

    Enter the speed or RCF, run time, and temperature specified by the test method, confirming the settings match the protocol before starting.

  7. 5.7

    Start the run and monitor briefly

    Lab Technician

    Start the centrifuge and stay near it for the first minute of acceleration to listen and watch for vibration, unusual noise or an error code.

    Checkpoint: No unusual vibration or noise is detected during the initial acceleration.

  8. 5.8

    Stop the run if imbalance occurs

    Lab Technician

    If vibration, noise or an imbalance error occurs, stop the run immediately, wait for a complete stop, and re-balance the load before restarting.

  9. 5.9

    Wait for a complete stop before opening

    Lab Technician

    Wait until the rotor has come to a full stop, confirmed by the display or by listening, before unlatching the chamber lid.

    Warning: Never attempt to slow or stop a spinning rotor by hand or by opening the lid early.

  10. 5.10

    Remove tubes carefully

    Lab Technician

    Open the rotor lid, remove tubes without disturbing the separated layers, and place them upright in a rack for the next processing step.

  11. 5.11

    Clean the rotor and chamber

    Lab Technician

    Wipe down the rotor, buckets and chamber interior after each use, especially after any spill or tube breakage, per the manufacturer's cleaning instructions.

  12. 5.12

    Log usage and report issues

    Lab Technician

    Record the run parameters and operator in the usage log, and report any vibration, noise or damage to maintenance for follow-up.

6.Quality checks

  • โ†’Every load is balanced within the rotor's stated weight tolerance before a run starts.
  • โ†’The rotor lid and chamber lid are confirmed locked before each run.
  • โ†’No run is left unattended during the initial acceleration phase.
  • โ†’Reported vibration or noise events are logged and reviewed by maintenance.

7.Records

  • โ†’Centrifuge usage log
  • โ†’Tube balancing weight records
  • โ†’Maintenance and service history
  • โ†’Imbalance or incident reports

8.KPIs

  • โ†’Number of imbalance stops per month
  • โ†’Percentage of runs completed without interruption
  • โ†’Average centrifuge downtime for repair
  • โ†’Number of tube breakages per quarter

9.Common mistakes

  • โ†’Estimating tube balance by eye instead of weighing on a balance.
  • โ†’Opening the lid before the rotor has fully stopped.
  • โ†’Running a partial load without a balance blank in the opposite position.
  • โ†’Not reporting minor vibration because the run finished anyway.

10.Revision history

RevisionDateDescriptionReviewed by
1.0September 15, 2026Initial releaseIlia Pirozhenko

This is a template. Adapt it to your organization, equipment and local regulations before use.

Ask this SOP

Nobody opens a PDF in the middle of a task. They ask.

Add this SOP to Perfect Wiki and your team gets answers in the chat app they already use, with a link to the exact step. Ask from ChatGPT, Claude or Copilot too.

Perfect Wiki AIExample answer

I only have one sample tube to spin, what do I do about balance?

Weigh your sample tube and prepare a balance blank tube of matching weight filled with water or buffer, then load it directly opposite your sample so the rotor stays balanced.Source: step 5.3 ยท Weigh and balance tubes
Ask your own question about this SOPโ€ฆSign up to keep asking
Word file vs Perfect Wiki

A downloaded SOP starts going out of date the day you save it.

Screen recorders like Scribe and Tango capture clicks. Perfect Wiki holds the whole procedure, including your recorded guides, and answers questions about it.

Word or PDFPerfect Wiki
Finding itDig through folders and email threadsAsk in Teams, Slack, kChat or Mattermost
Keeping it currentEmail a new version and hopeEdit once with AI, everyone sees the update
Everything in one placeText and imagesEmbed Scribe and Tango guides, SharePoint files and videos
Who can change itAnyone with the fileEditors you choose, everyone else reads
Common questions

Frequently asked questions

Didn't find what you're looking for? Contact our support โ†’

Your SOP library

Keep every SOP where your team can ask it.

Perfect Wiki is the knowledge base for Microsoft Teams, Slack, kChat and Mattermost. Store your SOPs, embed your Scribe and Tango guides, and let AI answer questions with a link to the right step.

No credit cardSetup in under 10 minutesCancel anytime